UC Davis |
Clustering analysis by Graph9 program. BLAST EST assembly against itself --> --> Generation of "Matrix" file using tcl_blast_parser.tcl program --> --> Clustering and bridges search by Graph9 program. Graph9 output with bridges info, see table lettuce_clustering at CGPDB: Clustering parameters were: Expect cutoff 1e-20, Identity cutoff 40% and Overlap cutoff 100 amino acids. |