• Intro

  • step_01
  • step_02
  • step_03
  • step_04
  • step_05
  • step_06
  • step_07
  • step_08
  • step_09
  • step_10
  • step_11
  • step_12
  • step_13
  • step_14
  • step_15
  • step_16
  • step_17
  • step_18
  • step_19
  • step_20
  • step_21
  • step_22
  • step_23
  • step_24

  • Credits



  • CGPDB
    UC Davis


    Step 14: Graphical representation of detected polymorphic sites

    Selected contigs with polymorphic sites viewed using Py_ContigViewer.
    Different genotypes are painted in different colors (lightblue, yellow and green horizontal bars) Contig consensus is shown as red horizontal bar at the bottom of image. Blue vertical bars are deletions, green vertical bars - insertions, red vertical bars - substitutions. Text windows display information about assembly at nucleotide level.













    Click here to find detailed description of the Py_ContigViewer